Dr. Bagci has one journal paper accepted in Computerized Medical Imaging and Graphics Journal
With the leadership of Dr. Sema Candemir, of National Library of Medicine, NIH, we have published the following paper in Computerized Medical Imaging and Graphics:
“Atlas-based Rib-Bone Detection in Chest X-rays”.
Dr. Candemir is working with Dr. Stefan Jaeger and Dr. Sameer Antani at NLM, and I have the opportunity to work with them on this study. The paper investigates using rib-bone atlases for automatic detection of rib-bones in chest X-rays (CXRs). We built a system that takes patient X-ray and model atlases as input and automatically computes the posterior rib borders with high accuracy and efficiency. In addition to conventional atlas, we propose two alternative atlases: (i) automatically computed rib bone models using Computed Tomography (CT) scans, and (ii) dual energy CXRs. We test the proposed approach with each model on 25 CXRs from the Japanese Society of Radiological Technology (JSRT) dataset and another 25 CXRs from the National Library of Medicine CXR dataset. We achieve an area under the ROC curve (AUC) of about 95% for Montgomery and 91% for JSRT datasets. Using the optimal operating point of the ROC curve, we achieve a segmentation accuracy of 88.91 ± 1.8 % for Mont!
gomery and 85.48 ± 3.3 % for JSRT datasets. Our method produces comparable results with the state-of-the-art algorithms. The performance of our method is also excellent on challenging X-rays as it successfully addressed the rib-shape variance between patients and number of visible rib-bones due to patient respiration.
Sema Candemir, Stefan Jaeger, Sameer Antani, Ulas Bagci, Les R. Folio, Ziyue Xu, George Thoma,
Atlas-based Rib-Bone Detection in Chest X-rays
Computerized Medical Imaging and Graphics
, Available online 13 April 2016, ISSN 0895-6111.